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    TXG
    Earnings call· Mar 2026(Q1 FY26)

    10x Genomics Q1 FY26 earnings call TXG

    May 7, 2026 Source

    Executive summary

    10x Genomics Q1 FY26 — Atera Launch Exceeds Expectations, Driving Spatial Momentum

    10x Genomics reported a solid start to the year, marked by strong sales momentum and the highly anticipated launch of its Atera instrument platform, which has garnered extraordinary customer response. The company is navigating a challenging capital equipment environment and expects near-term revenue cadence to reflect customer anticipation for Atera, while maintaining its full-year outlook. Management emphasized the long-term potential of AI-driven research and translational applications as key growth drivers for its single cell and spatial technologies.

    Highlights

    5
    • Q1 FY26 revenue of $150.8 million, up 9% year-over-year excluding prior-year settlement revenue.

    • Single Cell consumables revenue up 6% with double-digit growth in reaction volumes, driven by Flex Apex.

    • Spatial consumables revenue up 31%, driven by Xenium momentum.

    • Gross margin improved to 70% for Q1 FY26, up from 68% in prior year period.

    • Cash, cash equivalents, and marketable securities increased by $113 million year-over-year to $540 million.

    Concerns

    3
    • Total instrument revenue declined 24% year-over-year, with Chromium down 12% and Spatial down 32%.

    • Anticipated sequential revenue step-down in Q2 and Q3 FY26 due to customers delaying Spatial purchases in anticipation of Atera.

    • Initial production capacity for Atera will be limited in 2026, with approximately 40 units expected to ship in Q3/Q4.

    Guidance & targets

    8
    CategoryTargetConfidence
    Full-year 2026 Revenue
    $600 million to $625 million
    high materiality
    High
    Full-year 2026 Single Cell Consumables Reactions Growth
    double-digit growth
    medium materiality
    High
    Full-year 2026 Spatial Consumables Revenue Growth
    double-digit growth
    medium materiality
    High
    Q2 FY26 Revenue
    step down sequentially from Q1
    medium materiality
    High
    Q3 FY26 Revenue
    broadly similar to the second quarter
    medium materiality
    High
    Atera Shipments Contribution to Revenue
    begin contributing meaningfully to revenue
    high materiality
    High
    Full-year 2026 Operating Expenses
    roughly flat
    medium materiality
    High
    Atera Units to be Placed
    approximately 40 units
    high materiality
    High

    Segment performance

    9
    SegmentRevenueYoYQoQMargin
    Total Consumables
    Growth in both Single Cell and Spatial consumables.
    13%
    Single Cell Consumables
    Supported by double-digit growth in reaction volumes, with Flex Apex being the most popular assay.
    Reaction volumes growth: double-digitMost popular assay by volume: Flex Apex
    6%
    Spatial Consumables
    Driven by Xenium consumables momentum.
    31%
    Total Instrument
    Decline due to Chromium and Spatial instrument revenue decreases, and anticipation of Atera launch.
    -24%
    Chromium Instrument
    Decline in instrument revenue.
    -12%
    Spatial Instrument
    Decline in instrument revenue, primarily due to anticipation of Atera launch.
    -32%
    Americas
    Growth excluding impact of license and royalty revenue in Q1 2025.
    9%
    EMEA
    Strong growth.
    16%
    APAC
    Solid growth.
    5%

    Operational metrics

    4
    Gross margin
    70%vs 68% in Q1 FY25
    Q1 FY26

    Increase primarily driven by lower warranty costs and lower inventory write-downs.

    Total operating expenses
    -15%YoY
    Q1 FY26

    Primarily driven by lower outside legal expenses and lower personnel costs. Excluding the one-time gain on settlement in Q1 2025, operating expenses decreased 20%.

    Cash, cash equivalents, and marketable securities
    $540 millionup $113 million YoY, up $16 million sequentially
    Q1 FY26 end

    Increased by over $100 million year-over-year.

    Atera sample processing capacity
    up to 800
    annual

    A single instrument capable of processing up to 800 whole transcriptome, 1 cm² samples per year, or more than 3,000 if using targeted Atera Select panels.

    Industry KPIs

    4
    MetricValueDetails
    Revenue EPS guidance$600 million to $625 millionUSD
    Pricing price realizationsimilar to Q4
    Segment organic revenue growthAmericas 9%; EMEA 16%; APAC 5%%
    Instruments vs consumables services mix13% consumables growth; -24% instrument decline%

    Product announcements

    1
    ProductTypeDetails
    Ateralaunch

    Deals & partnerships

    5
    Chan Zuckerberg InitiativeCollaboration on the Billion Cells Project

    Partnership reflecting and reinforcing trends in AI-driven research and large-scale data generation.

    Arc InstituteCollaboration around the Virtual Cell Challenge

    Partnership reflecting and reinforcing trends in AI-driven research and large-scale data generation.

    Xaira TherapeuticsCollaboration to build the largest perturbation dataset ever reported

    Partnership reflecting and reinforcing trends in AI-driven research and large-scale data generation.

    BioptimusCollaboration on STELA, a global initiative to profile up to 100,000 patient tissue specimens

    Bioptimus is an AI-focused biotech company. The initiative aims to build a data backbone for a world model of biology, starting on Xenium and planning to expand to Atera over time.

    Chan Zuckerberg BiohubNew $500 million Virtual Biology Initiative$500 million

    The initiative aims to build AI models that can accurately simulate cells and tissues in silico, galvanizing the scientific ecosystem for advancing science and medicine.

    Risks & headwinds

    4
    Challenging capital equipment environmentQ1 FY26, ongoing

    Spatial instrument revenue down 32% YoY; Chromium instrument revenue down 12% YoY

    Mitigation: Atera's compelling capabilities are driving customers to find CapEx; strategic timing of Atera launch to align with budget cycles.

    Customer delay of Spatial product purchasesQ2 and Q3 FY26

    Q2 and Q3 FY26 revenue expected to step down sequentially from Q1

    Mitigation: Anticipated and incorporated into full-year guidance; existing products continue to be used for ongoing studies and established workflows.

    Limited initial production capacity for AteraQ4 FY26

    Approximately 40 units expected to ship in Q3-Q4 FY26

    Mitigation: Ramping up production for 2027; deliberate and rigorous approach to building and testing the sophisticated instrument.

    Pricing headwind from Flex ApexQ1 FY26, near-term

    Similar to Q4 FY25

    Mitigation: Early in launch, happy with progress and large scaling of volumes; expect widespread adoption and pricing stabilization in 2027.

    What to watch in Q2 FY26

    5

    Q2 FY26 Revenue

    next quarter
    Current$150.8 million (Q1 FY26)
    Targetlow single-digit decline sequentially from Q1

    Why it matters

    Verifies management's expectation of a sequential step-down in revenue due to Atera anticipation, impacting near-term financial performance.

    We expect second quarter revenue to step down sequentially from Q1, reflecting lower Spatial sales as customers wait for Atera to start shipping.

    Q&A highlights

    7

    What is the customer reception and funnel for Atera, and how will its launch impact the existing Spatial portfolio and Q2/Q3 sales?

    Customer response to Atera has been extraordinary, exceeding expectations, with strong pre-orders from across the market. The company anticipated changes to ordering dynamics for existing Spatial products, which are incorporated into the full-year guide. Existing products continue to be used robustly for ongoing studies.

    And overall, it's all going really very much in accordance with our expectations. Again, we have lots of experience with past product launches and new kind of versions of things and new capabilities. And so we've been prepared. And of course, there's going to be effect on customer order patterns.

    asked by Patrick Donnelly · answered by Serge Saxonov

    2 min read6 chapters

    Detailed Narrative

    01

    Atera Launch and Capabilities

    The company launched Atera, its new instrument platform, which is described as the most significant product introduction in its history. Atera enables spatial whole transcriptome analysis with single cell sensitivity at scale, processing up to 800 whole transcriptome 1 cm² samples per year or over 3,000 with targeted panels. It builds on the Xenium workflow, uses standard glass slides, and features powerful computational tools for efficient data processing, addressing historical trade-offs in spatial biology.

    02

    Extraordinary Customer Response to Atera

    Customer reception to Atera has exceeded high expectations, with researchers calling it a 'technology leap' and the 'holy grail.' This enthusiasm is translating into strong pre-orders, with customers immediately focusing on integrating Atera into multi-year research programs and large cohort studies. The platform is seen as a 'must-have' despite a challenging capital equipment environment, with customers finding CapEx for its acquisition.

    03

    AI as a Structural Tailwind

    AI is identified as a significant and structural tailwind for the business, driving demand for large amounts of high-quality biological data. Products like Flex Apex and Atera are designed to meet this need, with intense interest from customers building AI models. Partnerships with Chan Zuckerberg Initiative, Arc Institute, Xaira Therapeutics, and Bioptimus (for the STELA initiative) underscore the growing importance of AI-driven research and large-scale data generation.

    04

    Translational Applications and Clinical Evidence

    There is growing interest in translational applications across academia and biopharma, with a focus on identifying human-relevant drug targets and biomarkers. Flex Apex and Xenium have proven valuable in these settings, and Atera is expected to extend this momentum by enabling larger studies with more information content. The company is pursuing internal efforts to generate clinical evidence for tissue-based spatial profiling in oncology and blood-based single cell monitoring in autoimmune disease.

    05

    Spatial Portfolio Strategy and Cannibalization

    The company anticipates some customers may delay purchases of current Spatial products (Xenium, Visium) in anticipation of Atera, a dynamic factored into the full-year guidance. While Atera is expected to reinforce the trend towards imaging-based readouts and eventually attract more applications, existing platforms like Visium will continue to be used robustly for ongoing projects and established workflows due to their proven capabilities and customer loyalty.

    06

    Financial Performance and Operational Discipline

    The company has significantly improved its operating profile over the past year, growing its cash balance by over $100 million despite a challenging macro environment. Gross margin improved due to lower warranty costs and inventory write-downs. Operating expenses decreased significantly year-over-year, reflecting disciplined cost management, with expectations for OpEx to be roughly flat year-on-year for FY26.

    AI-generated summary of the company’s earnings call. Not investment advice.